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In a data plot about half the data points will lie below the line that best fits?
Yes. The exception arises when you have outliers.
What is the difference between bode plot and root locus?
Bode plot is for Frequency Response Analysis Root-Locus plot is for time-domain analysis
What is a line plot using dots?
A scatter plot.
What is 0.37 acres equals how many plot?
It depends on the size of each plot. A plot is not a recognised standard size.
What word is a line plot using dots?
A scatter plot.
What is the significance of the Ramachandran plot for glycine in protein structure analysis?
The Ramachandran plot for glycine in protein structure analysis is significant because it shows the allowed regions of dihedral angles for glycine residues in a protein. This helps researchers understand the possible conformations that glycine can adopt in a protein structure, which is important for studying protein folding and function.
What is the significance of proline in the Ramachandran plot and how does it affect protein structure?
Proline is significant in the Ramachandran plot because it has a unique structure that restricts its flexibility. This affects protein structure by introducing kinks or bends in the protein chain, which can influence the overall shape and stability of the protein.
What insights can be gained from analyzing the glycine Ramachandran plot in protein structure prediction?
Analyzing the glycine Ramachandran plot in protein structure prediction can provide insights into the allowed conformations of glycine residues in proteins. This information can help in understanding the structural flexibility and stability of proteins, as well as in predicting their overall structure and function.
What is the significance of glycine in the Ramachandran plot?
In the Ramachandran plot, glycine is significant because it is the only amino acid that can adopt both the alpha and beta regions due to its small side chain. This flexibility allows glycine to occupy a wider range of dihedral angles compared to other amino acids, influencing protein structure and stability.
What is ramachandran plot?
A Ramachandran plot (also known as a Ramachandran map or a Ramachandran diagram), developed byGopalasamudram Narayana Ramachandran, is a way to visualize dihedral angles φ against ψ of amino acid residues in protein structure. It shows the possible conformations of φ and ψ angles for a polypeptide. Mathematically, the Ramachandran plot is the visualization of a function . The domain of this function is the torus. Hence, the conventional Ramachandran plot is a projection of the torus on the plane, resulting in a distorted view and the presence of discontinuities. One would expect that larger side chains would result in more restrictions and consequently a smaller allowable region in the Ramachandran plot. In practice this does not appear to be the case; only the methylene group at the β position has an influence. Glycine has a hydrogen atom, with a smaller van der Waals radius, instead of a methyl group at the β position. Hence it is least restricted and this is apparent in the Ramachandran plot for Glycine for which the allowable area is considerably larger. In contrast, the Ramachandran plot for proline shows only a very limited number of possible combinations of ψ and φ. The Ramachandran plot was calculated just before the first protein structures at atomic resolution were determined. Forty years later there were tens of thousands of high-resolution protein structures determined by X-ray crystallography and deposited in the Protein Data Bank (PDB). From one thousand different protein chains, Ramachandran plots of over 200 000 amino acids were plotted, showing some significant differences, especially for glycine (Hovmöller et al. 2002). The upper left region was found to be split into two; one to the left containing amino acids in beta sheets and one to the right containing the amino acids in random coil of this conformation. One can also plot the dihedral angles in polysaccharides and other polymers in this fashion. For the first two protein side-chain dihedral angles a similar plot is the Janin Plot.
What is concept behind ramachandran plot to determine structure of proteins?
The concept behind the Ramachandran plot is that by visualizing the opposite dihedral angles of an amino acid against each other, the structure of a protein is revealed. The Ramachandran plot was invented by Indian scientist Gopalasamudram Ramachandran.
What is the principle of ramachandran plot?
the permitted value of phi and psi are usually indicated on a 2-d map of the phi-psi plane,also known as ramachandran plot
What is the Ramachandran's plot?
The?æRamachandran?æplot was developed in 1963 as a way to visualize backbone dihedral angles of?æamino acid angles in protein structures. It was developed by G.N. Ramachandran, C. Ramachandran, and V. Sasisekharan.
Can Ramachandran plot be possible in spdbv or not?
ramchandran plot can be plotted in spdbv.. and position of each residues whether alfa helix or beta sheet can be can be seen in the plot by pressing ctrl+a.
What insights can be gained from analyzing the alanine Ramachandran plot in protein structure prediction?
Analyzing the alanine Ramachandran plot in protein structure prediction can provide insights into the preferred conformational angles of alanine residues in proteins. This information can help in understanding the overall structure and stability of the protein, as well as in predicting potential folding patterns and interactions within the protein molecule.
In a data plot about half the data points will lie below the line that best fits?
Yes. The exception arises when you have outliers.
What is a Phi angle?
The Phi angle is usually the second unknown angle after theta. It is typically used in the argument of a complex number, the phase of a wave in signal processing, in spherical coordinates, as one of the dihedral angles in the backbones of proteins in a Ramachandran plot, and as the internal or effective angle of friction.
